Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015932044.1_cds_XP_016478645.1_70268
CDS Infomation

[gene=LOC107800017] [db_xref=GeneID:107800017] [protein=30S ribosomal protein S1, chloroplastic-like] [protein_id=XP_016478645.1] [location=complement(join(74196..74300,75231..75317,75913..76023,76104..76385,77772..77852,77942..78217,78743..79054))] [gbkey=CDS]
Sequence

ATGGCTTCTTTGACACAACAATTCGGAGGGTTGAAATGCCCACCAATTTCAACAGCAAGG
GTTGAATCCAAGAAGCTTAAGGTGAATCCCATTAATCATCAGAATAAGAAGGCTAACAAA
GCAAGAATAGTAGCACAAGCTGCAGCAGTGGTCACAAATGCACAAACAAGAGAAAGACAA
AAGCTTAAGGAGATGTTCGAGGATGCCTATGAGCGATGCCGTACTGCACCTCTGGAAGGT
GTTGCCTTTACTGTTGAAGATTTTCACTCTGCCCTTGAAAAATATGATTTTGACTCTGAA
GTTGGTACCAAGGTCAAAGGAACAGTTTTCTCTGTGGATGCAAATGGAGCTCTAGTTGAC
ATCACTGCTAAATCATCTGCATACTTGCCTTTACGAGAGGCTTCACTTCACACCATCAAG
CACGTAGAGGAAGCCGGAATATTTCCTGGTTTGCGTGAGGAGTTTGTGGTGGTTGGCGAA
AATGAAGCTGATGATAGTTTGGTTTTGAGCTTGCGTTCGATTCAATATGACCTTGCATGG
GAACGATGTAGGCAGCTACAAGCTGAAGATGTTGTTGTCAAAGGCAAGGTCGTTGGTGCA
AATAAAGGTGGAGTGGTGGCTCTGGTGGAGGGGCTTCGTGGTTTTGTTCCGTTCTCGCAG
ATATCAACGAAATCAACTGCAGAGGAACTTTTGGAAAAGGAGCTTCCTCTGAAGTTTGTT
GAGGTTGATGAAGAGCAATCCAGACTTGTGCTCAGCAATCGTAAGGCCATGGCTGATAGT
CAGGCACAATTGGGAATAGGCTCAGTCGTTCTTGGAACAGTTCAGAGCTTGAAACCATAT
GGTGCTTTCATTGACATTGGTGGGATCAATGGCCTTCTTCATGTGAGTCAGATCAGTCAT
GATCGTGTCTCTGATATTGCAACAGTCCTCCAGCCTGGTGACACTCTCAAGGTCATGATA
TTGAGCCATGATCGTGAGAGAGGTCGAGTGAGCCTTTCAACAAAGAAGCTAGAGCCTACA
CCTGGTGACATGATTCGCAATCCAAAGCTTGTCTTTGAGAAAGCTGAGGAGATGGCCCAA
ACATTCAGGCAGAGAATTGCCCAAGCTGAAGCCATGGCCCGTGCAGATATGCTGAGATTC
CAGCCTGAGAGTGGATTGACCCTGAACTCTGACGGGATTTTAGGCCCGCTGACCTCTGAA
CTACCTGAAGATGGACTGGATTTGAGTGAGATTCCGCCAGCTGAAGATTTATGA

Peptide Sequence

PEP ID

XP_016478645.1
PEP Infomation

PREDICTED: 30S ribosomal protein S1, chloroplastic-like [Nicotiana tabacum]
Sequence

MASLTQQFGGLKCPPISTARVESKKLKVNPINHQNKKANKARIVAQAAAVVTNAQTRERQ
KLKEMFEDAYERCRTAPLEGVAFTVEDFHSALEKYDFDSEVGTKVKGTVFSVDANGALVD
ITAKSSAYLPLREASLHTIKHVEEAGIFPGLREEFVVVGENEADDSLVLSLRSIQYDLAW
ERCRQLQAEDVVVKGKVVGANKGGVVALVEGLRGFVPFSQISTKSTAEELLEKELPLKFV
EVDEEQSRLVLSNRKAMADSQAQLGIGSVVLGTVQSLKPYGAFIDIGGINGLLHVSQISH
DRVSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQ
TFRQRIAQAEAMARADMLRFQPESGLTLNSDGILGPLTSELPEDGLDLSEIPPAEDL

Transcript Sequence

Gene sequence data has not been registered.